Search results

• Colabfold

  Downloadable

  msa-search

  Generates a multiple sequence alignment from a query sequence and a protein sequence database search.

  Model
• proteinmpnn-nim

  Run ProteinMPNN inverse folding via NVIDIA NIM to design protein sequences for a target backbone. Sends user-provided PDB files and design parameters to NVIDIA's hosted API, authenticated with an environment API key, or to a user-selected local NIM. Use f

  Skill
• Openfold

  Downloadable

  openfold2

  Predicts the 3D structure of a protein from its amino acid sequence, multiple sequence alignments, and templates.

  Model
• Openfold

  Downloadable

  openfold3

  OpenFold3 is a third-generation biomolecular foundation model that predicts the three-dimensional structures of molecular complexes (proteins, DNA, RNA, ligands)

  Model
• MIT

  Downloadable

  Boltz-2

  Predict complex structures using Boltz-2.

  Model
• openfold2-nim

  Use this skill for OpenFold2, NVIDIA's BioNeMo NIM microservice for monomer protein structure prediction. Invoke whenever the user mentions OpenFold2, AlphaFold2-like monomer folding, protein sequence-to-structure prediction, A3M MSAs, mmCIF templates, ho

  Skill